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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8140875 chr22:19840591 C/G EIF3D chr22:36906897-36925483:- 0.55 5.9 6.84E-9 Box Plot
THCA rs8140875 chr22:19840591 C/G EIF3L chr22:38244875-38285414:+ 0.66 6.21 1.15E-9 Box Plot
THCA rs8140875 chr22:19840591 C/G EIF4ENIF1 chr22:31832963-31892094:- 0.71 6.78 3.65E-11 Box Plot
THCA rs8140875 chr22:19840591 C/G EP300 chr22:41487790-41576083:+ 0.49 6.54 1.62E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G GAPVD1 chr9:128024073-128129486:+ -0.47 -6.17 1.48E-9 Box Plot
THCA rs8140875 chr22:19840591 C/G GRAMD4 chr22:46971909-47075687:+ 0.71 6.17 1.48E-9 Box Plot
THCA rs8140875 chr22:19840591 C/G GTPBP1 chr22:39101728-39134304:+ 0.61 6.34 5.42E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G HIC2 chr22:21771693-21805752:+ 0.54 6.36 4.61E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G HPS4 chr22:26839389-26879803:- 0.62 5.89 7.31E-9 Box Plot
THCA rs8140875 chr22:19840591 C/G HSCB chr22:29138019-29153503:+ 0.59 6.44 2.88E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G KLHL22 chr22:20795806-20850170:- 0.72 7.26 1.63E-12 Box Plot
THCA rs8140875 chr22:19840591 C/G LDOC1L chr22:44888452-44894178:- 0.49 6.43 3.03E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G LMF2 chr22:50941378-50946120:- 0.61 6.56 1.38E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G LOC150381 chr22:46449726-46454400:+ 0.55 5.89 7.17E-9 Box Plot
THCA rs8140875 chr22:19840591 C/G LOC284900 chr22:28315364-28404267:+ 0.54 6.57 1.32E-10 Box Plot